MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus aureus
STF.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 123
bases: 2,698,428 bps
CDS: 2,464
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 2,534
Total number of protein coding genes annotated/found:
2,464
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5004|JADGKH010000029.1
SEQF5004_00278
Genome Viewer
NA
AA
435/145
869-435
Protein map
SEQF5004|JADGKH010000029.1
SEQF5004_00279
Genome Viewer
NA
AA
516/172
1695-1180
hypothetical protein
SEQF5004|JADGKH010000029.1
SEQF5004_00280
Genome Viewer
NA
AA
870/290
1826-2695
HTH-type transcriptional activator AmpR
SEQF5004|JADGKH010000029.1
SEQF5004_00281
Genome Viewer
NA
AA
2610/870
5363-2754
Chaperone protein ClpB
SEQF5004|JADGKH010000029.1
SEQF5004_00282
Genome Viewer
NA
AA
1815/605
7380-5566
O-acetyltransferase OatA
SEQF5004|JADGKH010000029.1
SEQF5004_00283
Genome Viewer
NA
AA
309/103
8236-7928
Fe-S protein maturation auxiliary factor SufT
SEQF5004|JADGKH010000029.1
SEQF5004_00284
Genome Viewer
NA
AA
825/275
8350-9174
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU
SEQF5004|JADGKH010000029.1
SEQF5004_00285
Genome Viewer
NA
AA
1317/439
9226-10542
Coenzyme A disulfide reductase
SEQF5004|JADGKH010000029.1
SEQF5004_00286
Genome Viewer
NA
AA
390/130
11102-10713
hypothetical protein
SEQF5004|JADGKH010000029.1
SEQF5004_00287
Genome Viewer
NA
AA
903/301
12825-11923
putative protein
SEQF5004|JADGKH010000029.1
SEQF5004_00288
Genome Viewer
NA
AA
3654/1218
16644-12991
ATP-dependent helicase/nuclease subunit A
SEQF5004|JADGKH010000029.1
SEQF5004_00289
Genome Viewer
NA
AA
3477/1159
20121-16645
ATP-dependent helicase/deoxyribonuclease subunit B
SEQF5004|JADGKH010000029.1
SEQF5004_00290
Genome Viewer
NA
AA
576/192
20856-20281
Signal peptidase IB
SEQF5004|JADGKH010000029.1
SEQF5004_00291
Genome Viewer
NA
AA
525/175
21396-20872
Signal peptidase IB
SEQF5004|JADGKH010000029.1
SEQF5004_00292
Genome Viewer
NA
AA
576/192
21976-21401
TVP38/TMEM64 family inner membrane protein YdjZ
SEQF5004|JADGKH010000029.1
SEQF5004_00293
Genome Viewer
NA
AA
1332/444
23632-22301
Glucose-6-phosphate isomerase
SEQF5004|JADGKH010000029.1
SEQF5004_00294
Genome Viewer
NA
AA
1206/402
23983-25188
Argininosuccinate synthase
SEQF5004|JADGKH010000029.1
SEQF5004_00295
Genome Viewer
NA
AA
1380/460
25178-26557
Argininosuccinate lyase
SEQF5004|JADGKH010000029.1
SEQF5004_00296
Genome Viewer
NA
AA
930/310
26799-27728
Glycerophosphodiester phosphodiesterase
SEQF5004|JADGKH010000029.1
SEQF5004_00297
Genome Viewer
NA
AA
1245/415
29508-28264
NAD-specific glutamate dehydrogenase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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